CDS

Accession Number TCMCG017C29994
gbkey CDS
Protein Id OMO63212.1
Location join(10361..10602,10867..11247,11590..11676,11778..12018,12093..12218,12324..12380,12488..12574,13214..13309,13501..13551,13733..13807,13901..13987,14288..14379,14467..14599,15367..15480,15578..15661,15755..15832,15909..15967,16498..16684,16761..16859,17513..17941)
GeneID InterPro:IPR000330
Organism Corchorus olitorius
locus_tag COLO4_32665

Protein

Length 934aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01021140.1
Definition SNF2-related protein [Corchorus olitorius]
Locus_tag COLO4_32665

EGGNOG-MAPPER Annotation

COG_category L
Description DNA repair and recombination protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10875        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03440        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000018        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006311        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0010332        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015616        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030491        [VIEW IN EMBL-EBI]
GO:0030702        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0033170        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035822        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0035861        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044403        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045003        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051701        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061806        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071241        [VIEW IN EMBL-EBI]
GO:0071248        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071479        [VIEW IN EMBL-EBI]
GO:0071480        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090734        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGAGAGAAACACAGTCCTCCTCATCTATGGAGGAAGACGAAGAGGATGAATTATTCTCCGATTCGGATTCCGATGCAAACGATTCAAGCGACGAATACACAGTTGACCGTCAAGAAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAGTTCGACGATGACGGTGATGGGGGAGAATCCACCGCGCACCACCCACCGTCGAACGAAGAGCTAAAATCCAAGAATGTCGATGCTTTATTGAGGGGCAATCTAGTTGTGAGAAGACAATCGCTGCTTCCACGAGTTCTTTCAGTGGCAGACGGAGCTGCAGTTTGTCGGAAACCATTTAAGCCCCCATGTTCCGATGGCTACAGTGACGGGAATGAACATCTTGCACGGCGTCTTTGGGCTCGTAAACGCTTTGTTCCATGGGGCTCTTCAAGGCCAGCGTTAGTTGCAATAACCAATCGGCTGGATGTAACTAGAACAGACGGGAATGATGTTGGGGAAGAACTTGTGACTCTGCCACCTGGTGTTGATCCTCTCATATTGTGGCAACCTGAAGAATCTGAAGATGGACCCAACAACTTGGTGCCCATAGCAGTGGATCCCTTGCTCGTTCGTTTTCTTCGACCCCATCAAAGAGAAGGGGTTCAGTTCATGTTTGAATGTGTTTCCGGGGTATATAGTGCTGCCAACATATACGGATGCATCCTTGCTGATGATATGGGTTTGGGAAAGACATTGCAGTCAATTACTTTGCTCTATACTCTTCTACGTCAAGGGTTTGATGGGAAGCCGATGGTTAAGAAGGCCATAATTGTCACCCCAACCAGTCTTGTCAGTAACTGGGAGGCAGAAATCAAGAAGTGGGTTGGAGAAAGAGTTCATCTTATAGCTCTTTGTGAAAGCAGTAGAGATGATGTTGTCTCTGGAATTGACAGCTTCACAAGTCCCCGTAGCTCTTTACAGGTTCTGATTATTTCCTATGAGACATTTAGGATGCATTCATCAAAATTTTGCCAAAGTGAATCTTGTGACCTTCTCATTTGTGATGAGGCTCACAGGCTAAAAAATGACCAGACAATAACAAACCGGGCATTGGCTGCTCTCTCATGTAAGCGTCGAATTTTGTTATCTGGAACTCCCATGCAGAATGACCTTGAAGAGTTCTTTGCAATGGTCAACTTCACTAATCCAGGGATTTTAGGTGATGCTGGATACTTTCGTCGTTACTATGAGACACCGATCATTTGTGGAAGAGAACCTACTGCTAGTGAAGAAGAGAAGAAGCTAGCGGCAGAACGATCTTCAGAATTAAGTGCAAAAGTAAATCAGTTCATATTGAGGAGGACTAACGCGTTACTATCAAATCATCTCCCTCCTAAGATAGTTGAAGTAGTTTGCTGCAAGTTGAGTCCTCTTCAGGCAGAGTTATACAATCATTTTATACATTCCAAAAATGTTAAACGAGCCATCACTGAAGAAGCAAAGCAATCAAAGATATTGGCTTATATTACAGCGCTTAAGAAGCTATGCAATCATCCAAAGCTAATTTATGATACCATACGAAGTGGAAGTTCTGGAACTACAGGATTTGAGGACTGTATGCGCTTTTTCCCACCAGAGATGTTCTCAGGAAGATCTGGATCATGGACTGGTGGTGATGGGGCTTGGGTTGAACTATCTGGAAAAATGCATGTATTAGCGCGATTGCTGGCTCATCTACGTCAGAGAACTGATGACCGCATCGTTCTTGTGTCAAACTATACACAGGATGAGTTTGTGTTTCTCTTAAGTAGCAAAGCTGGCGGTTGCGGCCTTAATTTGATTGGCGGTAACCGACTTGTCCTGTTTGACCCTGACTGGAACCCTGCTAATGATAAGCAAGCTGCTGCAAGGGTTTGGAGAGACGGACAGAAAAAGAGAGTTTTCATTTACAGATTCCTAAGCACTGGAACAATTGAAGAAAAGGTATACCAGCGTCAAATGTCAAAGGAAGGGCTTCAAAAAGTTATCCAGCAAGAGCAAGTGGACAGCCATATGGTACAGGGAAACTTTTTCTCAACAGAAGATTTACGGGACCTTTTCACATTTTATGATAATGTGAGGTCTGAAATTCATGAGAAGATGAATTGCAACCGTTGTGAAAATTGTGGGGTTGAGTCAGAGAACAGAGAAGAGCAGGGAGAATATGAAACAGAAATTAGTTCTGGTTCTGATCAAGAGGTTACGGACATAGGTGGATTTGCAGGACTAGCCGGATGTTTGGATAAGTTAAAGAGCTCAGAAAAACAGGTGGGGACTCCCTTAGAAGAGGATCTAGTTAACTGGGGCCATCATTTTCACTCAGATACAGTTCCAGATGCTATTCTTCAAGCTTCAGCTGGTGATGAGATCACATTTGTTTTCACCAATCAAATAGATGGGAAGCTTGTTCCTATTGAATCAAAGGCAAACCCAATGATGCAGCAAAGGGAAGGAAGTAAAGGCCAATATATCGGCAAGATGAACATGATTGAAAGAGATGGAAACAAGTTCCAGCAGAAGATGGTGAACCAAAACCTGAATTCTAAGTCAAACTTTTTGTCCAAACATCACAATCTATTAAATTCTGTCTCCTCCAATAGAATTTCTTTGAGTAAAACTAGAACACCATCTCCTACTTGTTCAATCCCTTTCCAGGGGCAAACTGTAAAATCAATGAGAACTTGCTTAAAAGGTACAGTTCAGGAGACTATAGAGGGTAAAATTTCTGTTGGAAATCAATTGCCCTTGAAAAGACCATCCCCTGCTTATGTACAACATGATGATGATTTTCAGTAA
Protein:  
MPRETQSSSSMEEDEEDELFSDSDSDANDSSDEYTVDRQEGGGGEEEEEEFDDDGDGGESTAHHPPSNEELKSKNVDALLRGNLVVRRQSLLPRVLSVADGAAVCRKPFKPPCSDGYSDGNEHLARRLWARKRFVPWGSSRPALVAITNRLDVTRTDGNDVGEELVTLPPGVDPLILWQPEESEDGPNNLVPIAVDPLLVRFLRPHQREGVQFMFECVSGVYSAANIYGCILADDMGLGKTLQSITLLYTLLRQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSRDDVVSGIDSFTSPRSSLQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTITNRALAALSCKRRILLSGTPMQNDLEEFFAMVNFTNPGILGDAGYFRRYYETPIICGREPTASEEEKKLAAERSSELSAKVNQFILRRTNALLSNHLPPKIVEVVCCKLSPLQAELYNHFIHSKNVKRAITEEAKQSKILAYITALKKLCNHPKLIYDTIRSGSSGTTGFEDCMRFFPPEMFSGRSGSWTGGDGAWVELSGKMHVLARLLAHLRQRTDDRIVLVSNYTQDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQVDSHMVQGNFFSTEDLRDLFTFYDNVRSEIHEKMNCNRCENCGVESENREEQGEYETEISSGSDQEVTDIGGFAGLAGCLDKLKSSEKQVGTPLEEDLVNWGHHFHSDTVPDAILQASAGDEITFVFTNQIDGKLVPIESKANPMMQQREGSKGQYIGKMNMIERDGNKFQQKMVNQNLNSKSNFLSKHHNLLNSVSSNRISLSKTRTPSPTCSIPFQGQTVKSMRTCLKGTVQETIEGKISVGNQLPLKRPSPAYVQHDDDFQ